Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914718.1_cds_XP_016464687.1_57710
CDS Infomation

[gene=LOC107787608] [db_xref=GeneID:107787608] [protein=probable indole-3-pyruvate monooxygenase YUCCA4] [protein_id=XP_016464687.1] [location=join(49598..50239,50940..51188,51306..51428,52512..52745)] [gbkey=CDS]
Sequence

ATGGGTTCTTGTAAAGAAGAAGAAAAAACTGATCAACAACCAAAATGGTTATGGGTTAAT
GGACCTATAATAGTAGGTGCTGGACCTTCTGGTTTAGCAGTTTCAGCTTCTCTTAAAGAA
AATGGAGTCCCTTCACTTATTCTTGAAAGAAGTGATTGTATTGCTTCTTTATGGCAACAA
AAAACCTATGATCGTTTAAAACTTCATCTCCCTAAACAGTTTTGTCAACTCCCATTATTT
GGTTTTCCTGAAAATTTCCCTAAATACCCTTCAAAAAAACAGTTCATTTCTTACTTAGAG
GATTATGCTAAACACTTTGGTATAATTCCCAAGTTTAAACAGTCTGTAAAAGTTGCAGAA
TTTGATCATGTTAGTGGATTTTGGAAGGTGGAAACTCAAGATTTTTTGTATCTTTCAAAG
TGGTTGATTGTGGCTACAGGGGAAAATGCAGAGCCAGTTATACCAGAAATTCAAGGGATT
GGTAAGTTTAAAGGAACAGTAATGCATACTAGTCTTTATAAGTCTGGTACTGAGTTTAAT
AATCAAAGGGTTTTGGTAATTGGCTGTGGAAATTCTGGTATGGAAGTTAGCTTGGACCTT
TGTAGACATAATGCCATCCCTCACATGGTCGTCAGAAATTCCGTGCATATTTTACCAAGG
GAAATGTTAGGGATATCAACATTTTCAATAGCAATGGCACTTCTCAAATGGTTGCCTATA
AGAGTTGTTGACAAGTTGCTATTACTAGTAGCCAATTTGACCTTAGGTAGCACAGATAAG
TTAGGTCTCCGGCGACCAAAAACCGGTCCACTTGAACTGAAAAATGCCACCGGAAAAACT
CCGGTACTCGACGTTGGTGCATTGTCACAAATAAGAAATGGAAAAATTCAGATTATGCAC
GGTGTGAAGGAGATAACTAAAATAGGAGCAAAGTCTATAGATGGAAAAGAAGGAGAATTT
GATTCAATAATCCTAGCAACTGGATACAAAAGCAATGTTCCTTCTTGGCTTAAGGGAACT
GACTTCTTCACAGAACAAGGGATGCCAAAAACACCATTTCCTAATGGCTGGAAAGGGGAA
AATGGATTATACACGGTGGGGTTTACAAGAAGAGGGCTTTTAGGGACTGCAAATGATGCA
AAAAACATTGCCAGGGATATTAGTGATCAATGGAGGAAATACAAGGGCTTCTGCAAAAAT
TTTTGTACTTCAAGAAATCTATCAGATAGCCAGGGTATATGTTTTTAG

Peptide Sequence

PEP ID

XP_016464687.1
PEP Infomation

PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA4 [Nicotiana tabacum]
Sequence

MGSCKEEEKTDQQPKWLWVNGPIIVGAGPSGLAVSASLKENGVPSLILERSDCIASLWQQ
KTYDRLKLHLPKQFCQLPLFGFPENFPKYPSKKQFISYLEDYAKHFGIIPKFKQSVKVAE
FDHVSGFWKVETQDFLYLSKWLIVATGENAEPVIPEIQGIGKFKGTVMHTSLYKSGTEFN
NQRVLVIGCGNSGMEVSLDLCRHNAIPHMVVRNSVHILPREMLGISTFSIAMALLKWLPI
RVVDKLLLLVANLTLGSTDKLGLRRPKTGPLELKNATGKTPVLDVGALSQIRNGKIQIMH
GVKEITKIGAKSIDGKEGEFDSIILATGYKSNVPSWLKGTDFFTEQGMPKTPFPNGWKGE
NGLYTVGFTRRGLLGTANDAKNIARDISDQWRKYKGFCKNFCTSRNLSDSQGICF

Transcript Sequence

Gene sequence data has not been registered.